Download
The latest version is v0.5 (linux only)
Meta-Tissue.v.0.5.zip (compiled with Java 1.7)
MetaTissueMM_2019.zip (Compiled with Intel 18.0.3 compiler. Please try this if you encounter seg fault or tissue-by-tissue results give very different results from linear regression in R)
Meta-Tissue.v.0.4.zip (compiled with Java 1.7)
Old versions: (not recommended to use)
Meta-Tissue.v.0.3.zip (compiled with Java 1.7)
Meta-Tissue.v.0.3_java_1_06.zip : This version contains JAR files compiled with Java 1.6. Please replace MetaTissueInputGenerator.jar and Metasoft.jar in above zip file with ones in this zip file.
Version history
v0.5 (September 8, 2017): more options for MetaTissueMM
1. Added support to display all of Metasoft statistics.
v0.4 (September 18, 2014): more options for MetaTissueMM
1. Added support for covariate and dosage. Please see Install for file formats and options.
v0.3 (July 17, 2013): bug fix and more options for MetaTissueMM
1. Changed all options to long option.
2. Added new more powerful random effects model (set as default).
3. Added --cisonly option that performs only cis analysis.
4. Added --heuristic option that enables heuristic for standard error.
5. Added --savebeta option that saves beta and correlation files (if not set, delete files).
6. Fixed a few bugs that crashed MetaTissueMM.
v0.2 (March 27, 2013): bug fix and more options for MetaTissueMM
1. Added -t option that performs TBT only.
2. Added -d option that changes the number of digits to output.
3. Automatically gzip output files of MetaTissueMM and Metasoft.
4. Fixed a few bugs that crashed MetaTissueMM.
5. Fixed other minor bugs.
v0.1 (February 9, 2013): The first version to be released
Contact: Jae Hoon Sul (jhsul at cs dot ucla dot edu)